Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_74945954_74946611_R

Intron Information:

Intron Rank:

147186

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

74945954 - 74946611

Intron Length:

658

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTTAGTTC

5'SS Class:

weak_major

3'SS Sequence:

TCTTTTCCCTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACGTCAT

U12 Branch Point Sequence:

CTTCCACAATCA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

61.6

0.27

1.2

38.4

Major BPS

63.4

0.33

1.2

65.3

41.5

Major PPT

81.9

0.72

0.6

81.5

23.5

Minor 5ss

43.1

-0.8

3.2

59.1

45.8

Minor BPS

39.3

-0.8

2.2

54.7

43.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026500

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047204

74945898 - 74948797

2900