Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_763718_771344_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

763718 - 771344

Intron Length:

7627

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

ATTTTGCTTTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTCAT

U12 Branch Point Sequence:

TTTCCCTCATTT

Flanking Amino Acid:

RGGQIDAKTRDGLTPLHCAA

Intron Amino Acid Position:

311

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

0.9

81.3

32.8

Major BPS

79.7

0.74

79.6

35.6

Major PPT

73.4

0.53

1.1

76.4

37.4

Minor 5ss

32.7

-2

3.4

40.8

45.4

Minor BPS

60.5

0.41

1.8

81.98

39.5

Associated Gene:

Gene:

ANK2

Ensembl Gene ID:

ENSAPLG00000010858

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022370

682733 - 868670

185938

ENSAPLT00000043667

577881 - 868501

290621

ENSAPLT00000022125

686508 - 868670

182163

ENSAPLT00000032144

738078 - 868670

130593

ENSAPLT00000019915

577881 - 868670

290790

ENSAPLT00000031523

577881 - 868501

290621

ENSAPLT00000048349

577881 - 868501

290621

ENSAPLT00000011492

682733 - 868501

185769

ENSAPLT00000028235

577881 - 868670

290790

ENSAPLT00000047223

577881 - 865443

287563