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Intron Name: Anas_platyrhynchos_platyrhynchos_4_7694171_7695834_F


Intron Information:

Intron Rank:
10

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
7694171 - 7695834

Intron Length:
1664

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTAAACAGC

5'SS Class:
major

3'SS Sequence:
TTGTTTCTTTCAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
AAGTGAT

U12 Branch Point Sequence:
TCTTCTGCAAGT

Flanking Amino Acid:
WEIARRCVSGGIVEEYQLPY

Intron Amino Acid Position:
417

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
79.6
0.7
1
69.5
41.5

Major BPS
64.7
0.36
1.2
55.1
42.1

Major PPT
90.3
0.91
0.7
88.9
28.1

Minor 5ss
39.1
-1.2
3
52.1
44.7

Minor BPS
46.6
-0.1
2.4
71.32
46.1

Associated Gene:

Gene:
BMPR1B

Ensembl Gene ID:

Chromosome:
4

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

7515365 - 7697886
182522

7502282 - 7697886
195605