Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_7736778_7750098_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7736778 - 7750098

Intron Length:

13321

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

CTTTCTTTTTAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTGAT

U12 Branch Point Sequence:

TTTTGTTTAATT

Flanking Amino Acid:

KNCTDGLCMQGFIYPISTEQ

Intron Amino Acid Position:

377

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

78.8

35.5

Major BPS

87.6

0.93

0.8

77.4

37.3

Major PPT

81.5

0.71

0.9

86.5

24.9

Minor 5ss

34.9

-1.7

3.2

42.4

44.3

Minor BPS

74.8

0.86

1.7

91.31

32.6

Associated Gene:

Gene:

UNC5C

Ensembl Gene ID:

ENSAPLG00000002017

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034531

7711520 - 7950938

239419

ENSAPLT00000030866

7711520 - 7902896

191377