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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_8439614_8441609_F

Intron Information:

Intron Rank:
141397
Intron Class:
major
Intron Phase:
Intron Coordinates:
8439614 - 8441609
Intron Length:
1996

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
TTG|GTGAGTGCT
5'SS Class:
strong_major
3'SS Sequence:
CCTCATTATCCAG|C
3'SS Class:
major_PPT
U2 Branch Point Sequence:
TCATTAT
U12 Branch Point Sequence:
CCCTCATTATCC
Flanking Amino Acid:
Intron Amino Acid Position:

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
84.4
0.81
0.9
76.7
31.8
Major BPS
72.1
0.55
1.1
62.3
43.7
Major PPT
73.8
0.53
0.9
65.2
40
Minor 5ss
30
-2.3
3.2
38.4
40.8
Minor BPS
49.6
-0
1.9
58.84
46.1

Associated Gene:

Gene:
Ensembl Gene ID:
ENSAPLG00000026148
Chromosome:
4

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000017333
8313246 - 8464865
151620
ENSAPLT00000037577
8308227 - 8464865
156639
ENSAPLT00000032818
8274081 - 8464865
190785