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Intron Name: Anas_platyrhynchos_platyrhynchos_4_8530907_8531389_F

Intron Information:

Intron Rank:

133611

Intron Class:

major

Intron Phase:

Intron Coordinates:

8530907 - 8531389

Intron Length:

483

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATGCT

5'SS Class:

strong_major

3'SS Sequence:

TTTGTTTCTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TGCTTTTTAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.1

0.87

0.9

81.2

30.6

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

90.4

0.91

0.7

28.1

Minor 5ss

34.7

-1.7

3.3

50.4

Minor BPS

72.1

0.77

1.1

79.54

37.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021864

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033269

8530834 - 8532540

1707