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© 2019-2022 Kanadia Lab,
PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_855784_856239_F

Intron Information:

Intron Rank:
39
Intron Class:
major
Intron Phase:
1
Intron Coordinates:
855784 - 856239
Intron Length:
456

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
CAG|GTTCATTAC
5'SS Class:
major
3'SS Sequence:
TTTAATGCCACAG|A
3'SS Class:
major_PPT
U2 Branch Point Sequence:
TTTTAAT
U12 Branch Point Sequence:
GTCATTTTAATG
Flanking Amino Acid:
WLERDGKHATDTNLTQCLTK
Intron Amino Acid Position:
1524

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
65.1
0.36
1.2
64
36.9
Major BPS
99.5
1.23
0.5
98.2
4.2
Major PPT
71.9
0.49
1
65.2
40.8
Minor 5ss
35.1
-1.7
3
44.3
43.6
Minor BPS
56.5
0.07
1.4
55.77
40.4

Associated Gene:

Gene:
ANK2
Ensembl Gene ID:
ENSAPLG00000010858
Chromosome:
4

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000022370
682733 - 868670
185938
ENSAPLT00000043667
577881 - 868501
290621
ENSAPLT00000022125
686508 - 868670
182163
ENSAPLT00000032144
738078 - 868670
130593
ENSAPLT00000019915
577881 - 868670
290790
ENSAPLT00000031523
577881 - 868501
290621
ENSAPLT00000048349
577881 - 868501
290621
ENSAPLT00000011492
682733 - 868501
185769
ENSAPLT00000028235
577881 - 868670
290790
ENSAPLT00000047223
577881 - 865443
287563