Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_8564368_8565563_R

Intron Information:

Intron Rank:

142647

Intron Class:

major

Intron Phase:

Intron Coordinates:

8564368 - 8565563

Intron Length:

1196

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTTGTTCC

5'SS Class:

major

3'SS Sequence:

TTACGTTCTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAC

U12 Branch Point Sequence:

GTTTTTTTGACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.4

0.6

1.2

69.6

35.5

Major BPS

86.5

0.91

0.8

77.4

37.4

Major PPT

78.4

0.64

0.9

69.7

41.3

Minor 5ss

43.9

-0.7

2.3

54.4

42.7

Minor BPS

76.2

0.91

1.1

87.13

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024012

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040560

8564145 - 8573722

9578