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Intron Name: Anas_platyrhynchos_platyrhynchos_4_8568009_8573258_R

Intron Information:

Intron Rank:

142642

Intron Class:

major

Intron Phase:

Intron Coordinates:

8568009 - 8573258

Intron Length:

5250

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTAAGTACT

5'SS Class:

major

3'SS Sequence:

TCTTCTTTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTAAA

U12 Branch Point Sequence:

CCCTGCTAAACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.8

0.63

1.1

77.8

36.6

Major BPS

70.1

0.5

1.1

69.9

35.3

Major PPT

0.94

0.6

87.8

22.1

Minor 5ss

41.3

-1

2.8

62.9

Minor BPS

48.4

-0.1

2.1

58.03

47.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024012

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019088

8559017 - 8573346

14330

ENSAPLT00000040560

8564145 - 8573722

9578

ENSAPLT00000035505

8564988 - 8573722

8735