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Intron Name: Anas_platyrhynchos_platyrhynchos_4_860266_862561_F


Intron Information:

Intron Rank:
40

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
860266 - 862561

Intron Length:
2296

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTAAATACC

5'SS Class:
strong_major

3'SS Sequence:
CTTTGTCATACAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTGTCAT

U12 Branch Point Sequence:
GCTTCCTTAAAT

Flanking Amino Acid:
SGYEEESLEKADSMPEMPPE

Intron Amino Acid Position:
1615

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
87.2
0.88
0.9
81.2
30.6

Major BPS
84.8
0.86
1.1
85.7
34.9

Major PPT
78.9
0.65
0.9
73
36.5

Minor 5ss
36.4
-1.5
2.8
46.5
41.8

Minor BPS
78.4
0.97
1.3
86.3
39.3

Associated Gene:

Gene:
ANK2

Ensembl Gene ID:

Chromosome:
4

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

738078 - 868670
130593