Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_8642924_8643456_R

Intron Information:

Intron Rank:

154497

Intron Class:

major

Intron Phase:

Intron Coordinates:

8642924 - 8643456

Intron Length:

533

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTGAC

5'SS Class:

strong_major

3'SS Sequence:

TGATTTGGCATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTGAT

U12 Branch Point Sequence:

ATTTGCTCACTC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

95.8

1.08

0.7

84.9

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

61.8

0.27

57.2

43.1

Minor 5ss

-1.9

3.2

42.9

44.7

Minor BPS

47.6

-0.2

2.2

64.69

41.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030655

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017360

8641543 - 8745917

104375