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Intron Name: Anas_platyrhynchos_platyrhynchos_4_8643541_8681201_R

Intron Information:

Intron Rank:

154498

Intron Class:

major

Intron Phase:

Intron Coordinates:

8643541 - 8681201

Intron Length:

37661

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTCAG

5'SS Class:

strong_major

3'SS Sequence:

TGTTGTTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTCAA

U12 Branch Point Sequence:

GTTTCAAGAAAG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.5

0.84

0.9

70.6

41.3

Major BPS

0.57

1.2

77.7

37.1

Major PPT

0.83

0.8

84.6

Minor 5ss

39.7

-1.2

2.8

47.2

Minor BPS

-0.5

2.1

57.48

42.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030655

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017360

8641543 - 8745917

104375