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Intron Name: Anas_platyrhynchos_platyrhynchos_4_8794541_8806826_R

Intron Information:

Intron Rank:

143089

Intron Class:

major

Intron Phase:

Intron Coordinates:

8794541 - 8806826

Intron Length:

12286

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTCAGTATA

5'SS Class:

major

3'SS Sequence:

TTTTTTTCCCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTGAC

U12 Branch Point Sequence:

TTTTCTTTTTTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.8

0.59

1.3

78.4

37.9

Major BPS

64.8

0.37

0.9

55.1

32.8

Major PPT

90.7

0.92

0.6

84.9

29.9

Minor 5ss

35.2

-1.7

2.7

44.1

43.1

Minor BPS

46.2

-0.2

3.6

83.31

38.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024329

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030777

8782411 - 8818548

36138