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Intron Name: Anas_platyrhynchos_platyrhynchos_4_8884697_8888388_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8884697 - 8888388

Intron Length:

3692

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGGTTT

5'SS Class:

strong_major

3'SS Sequence:

CCTTTTTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTTAA

U12 Branch Point Sequence:

CTTTCTTTAACA

Flanking Amino Acid:

ANIIAEVARNEFMRNPCVDA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

0.9

77.3

33.4

Major BPS

74.7

0.61

65.9

40.9

Major PPT

91.5

0.93

0.6

87.3

Minor 5ss

37.4

-1.4

3.5

52.2

Minor BPS

85.1

1.1

86.93

31.8

Associated Gene:

Gene:

RAP1GDS1

Ensembl Gene ID:

ENSAPLG00000016234

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021811

8865077 - 8928927

63851

ENSAPLT00000016958

8865841 - 8928387

62547