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Intron Name: Anas_platyrhynchos_platyrhynchos_4_8888515_8903013_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8888515 - 8903013

Intron Length:

14499

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCC|GTAAGTGTT

5'SS Class:

major

3'SS Sequence:

CTTTGTTTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTTTTTAATG

Flanking Amino Acid:

RALGNICYDSHEGRNAVDHA

Intron Amino Acid Position:

125

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.4

0.53

1.3

76.5

39.2

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

88.8

0.87

0.7

83.2

31.9

Minor 5ss

40.5

-1.1

3.4

62.8

Minor BPS

0.74

1.1

78.3

32.8

Associated Gene:

Gene:

RAP1GDS1

Ensembl Gene ID:

ENSAPLG00000016234

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021811

8865077 - 8928927

63851

ENSAPLT00000016958

8865841 - 8928387

62547