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Intron Name: Anas_platyrhynchos_platyrhynchos_4_8914024_8917108_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8914024 - 8917108

Intron Length:

3085

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTGAGAATT

5'SS Class:

strong_major

3'SS Sequence:

TGCTGTTCTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCGTAAT

U12 Branch Point Sequence:

GTAATGTTGACT

Flanking Amino Acid:

FEVLAPLAENDVIKLQLVEA

Intron Amino Acid Position:

259

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

0.9

32.9

Major BPS

71.8

0.54

1.2

71.9

Major PPT

79.9

0.67

0.9

76.9

37.3

Minor 5ss

34.4

-1.8

3.2

50.4

45.6

Minor BPS

48.8

-0

2.1

68.95

41.8

Associated Gene:

Gene:

RAP1GDS1

Ensembl Gene ID:

ENSAPLG00000016234

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021811

8865077 - 8928927

63851

ENSAPLT00000016958

8865841 - 8928387

62547