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Intron Name: Anas_platyrhynchos_platyrhynchos_4_8917253_8917519_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8917253 - 8917519

Intron Length:

267

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTACC

5'SS Class:

strong_major

3'SS Sequence:

CTTTTTATTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TGGCTTTTTATT

Flanking Amino Acid:

SDLMVLLLLGDESMQKLFEG

Intron Amino Acid Position:

307

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

96.6

1.1

0.7

87.9

25.6

Major BPS

96.5

1.15

0.6

34.2

Major PPT

88.8

0.87

0.7

81.4

34.9

Minor 5ss

-1.5

2.6

46.5

41.8

Minor BPS

49.4

0.04

1.6

64.98

40.4

Associated Gene:

Gene:

RAP1GDS1

Ensembl Gene ID:

ENSAPLG00000016234

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021811

8865077 - 8928927

63851

ENSAPLT00000016958

8865841 - 8928387

62547