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Intron Name: Anas_platyrhynchos_platyrhynchos_4_8917652_8918062_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8917652 - 8918062

Intron Length:

411

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGACTA

5'SS Class:

strong_major

3'SS Sequence:

TCATCTTGCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTCAT

U12 Branch Point Sequence:

ATTGTCTCATCT

Flanking Amino Acid:

ALAIANFARNDGNCIHMVDN

Intron Amino Acid Position:

351

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

0.9

73.5

37.2

Major BPS

77.2

0.67

1.2

79.6

35.6

Major PPT

72.4

0.5

0.9

67.8

37.5

Minor 5ss

35.7

-1.6

3.2

45.3

43.7

Minor BPS

51.3

0.12

1.9

74.07

42.9

Associated Gene:

Gene:

RAP1GDS1

Ensembl Gene ID:

ENSAPLG00000016234

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021811

8865077 - 8928927

63851

ENSAPLT00000016958

8865841 - 8928387

62547