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Intron Name: Anas_platyrhynchos_platyrhynchos_4_8918198_8919710_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8918198 - 8919710

Intron Length:

1513

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGCCTC

5'SS Class:

strong_major

3'SS Sequence:

TTTATTCATGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTCAT

U12 Branch Point Sequence:

TGTTCTTTATTC

Flanking Amino Acid:

LSALRNLAIPVVNKAKMLSA

Intron Amino Acid Position:

396

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

68.8

42.2

Major BPS

92.2

1.05

0.7

91.9

19.6

Major PPT

82.7

0.74

0.9

78.1

35.2

Minor 5ss

42.6

-0.8

3.1

56.9

41.9

Minor BPS

67.2

0.52

1.5

74.74

36.3

Associated Gene:

Gene:

RAP1GDS1

Ensembl Gene ID:

ENSAPLG00000016234

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021811

8865077 - 8928927

63851

ENSAPLT00000016958

8865841 - 8928387

62547