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Intron Name: Anas_platyrhynchos_platyrhynchos_4_8919837_8921041_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

8919837 - 8921041

Intron Length:

1205

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAAATA

5'SS Class:

strong_major

3'SS Sequence:

CGGCAACGTGTAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATGACAA

U12 Branch Point Sequence:

GCTCCGGCAACG

Flanking Amino Acid:

GTLRMLIDAQAEAAEQLGKN

Intron Amino Acid Position:

438

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.82

0.9

83.2

28.3

Major BPS

49.8

-0

1.1

58.8

38.1

Major PPT

51.4

0.03

43.5

37.4

Minor 5ss

36.4

-1.5

3.1

48.8

46.9

Minor BPS

-1

2.6

45.65

46.4

Associated Gene:

Gene:

RAP1GDS1

Ensembl Gene ID:

ENSAPLG00000016234

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021811

8865077 - 8928927

63851

ENSAPLT00000016958

8865841 - 8928387

62547