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Intron Name: Anas_platyrhynchos_platyrhynchos_4_8921182_8923232_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8921182 - 8923232

Intron Length:

2051

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTGGC

5'SS Class:

strong_major

3'SS Sequence:

CTATTTCTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTTTTTAATT

Flanking Amino Acid:

SALIRHSKSKDVIRTIVQSG

Intron Amino Acid Position:

485

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.1

0.8

0.9

73.6

37.1

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

82.6

0.73

0.7

81.4

30.3

Minor 5ss

34.7

-1.7

3.2

43.8

Minor BPS

84.9

1.17

0.8

94.97

24.6

Associated Gene:

Gene:

RAP1GDS1

Ensembl Gene ID:

ENSAPLG00000016234

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021811

8865077 - 8928927

63851

ENSAPLT00000016958

8865841 - 8928387

62547