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Intron Name: Anas_platyrhynchos_platyrhynchos_4_8923360_8924704_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8923360 - 8924704

Intron Length:

1345

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTGAGTATC

5'SS Class:

strong_major

3'SS Sequence:

CTTTGTATTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAC

U12 Branch Point Sequence:

AGGTTTTCACTT

Flanking Amino Acid:

ALALIAALELVTAEKDLENA

Intron Amino Acid Position:

527

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.2

1.04

0.7

90.4

20.6

Major BPS

90.1

0.99

0.7

91.6

20.3

Major PPT

84.2

0.77

0.8

81.4

34.9

Minor 5ss

34.8

-1.7

2.8

44.9

43.2

Minor BPS

45.7

-0.2

1.7

58.24

39.7

Associated Gene:

Gene:

RAP1GDS1

Ensembl Gene ID:

ENSAPLG00000016234

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021811

8865077 - 8928927

63851

ENSAPLT00000016958

8865841 - 8928387

62547