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Intron Name: Anas_platyrhynchos_platyrhynchos_4_8924834_8928259_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8924834 - 8928259

Intron Length:

3426

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGTATT

5'SS Class:

strong_major

3'SS Sequence:

TTCTTTTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTCTCAT

U12 Branch Point Sequence:

ATTTCTTTTACT

Flanking Amino Acid:

MVLICALIGSEPLQKEVQSM

Intron Amino Acid Position:

570

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.8

0.89

0.8

88.7

25.1

Major BPS

77.2

0.67

1.2

79.6

35.6

Major PPT

94.1

0.99

0.6

87.9

29.5

Minor 5ss

36.4

-1.5

48.3

41.8

Minor BPS

75.8

0.89

1.5

90.35

33.1

Associated Gene:

Gene:

RAP1GDS1

Ensembl Gene ID:

ENSAPLG00000016234

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021811

8865077 - 8928927

63851

ENSAPLT00000016958

8865841 - 8928387

62547