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Intron Name: Anas_platyrhynchos_platyrhynchos_4_8955363_9006992_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8955363 - 9006992

Intron Length:

51630

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGCGGC

5'SS Class:

major

3'SS Sequence:

TTTTTCTCTTTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

ATTTTTTTATTT

Flanking Amino Acid:

FIFGFNVIFWFLGIAFLGIG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.9

0.66

1.1

Major BPS

96.5

1.15

0.6

34.2

Major PPT

0.9

0.6

89.8

18.6

Minor 5ss

36.2

-1.6

3.3

41.6

45.3

Minor BPS

0.58

1.5

81.3

34.9

Associated Gene:

Gene:

TSPAN5

Ensembl Gene ID:

ENSAPLG00000016142

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018585

8936595 - 9007098

70504

ENSAPLT00000017640

8926228 - 9007073

80846

ENSAPLT00000016858

8935275 - 9007073

71799