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Intron Name: Anas_platyrhynchos_platyrhynchos_4_9039624_9041571_R


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
9039624 - 9041571

Intron Length:
1948

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GGC|GTAAGTAAA

5'SS Class:
major

3'SS Sequence:
TCCCCTCCAATAG|T

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTAAT

U12 Branch Point Sequence:
TGTTTTTTAATC

Flanking Amino Acid:
SKFDTVEDFWALYNHIQLSS

Intron Amino Acid Position:
74

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
71.4
0.51
1.3
74.1
38.3

Major BPS
99.5
1.23
0.5
98.2
4.2

Major PPT
66.3
0.37
0.8
62.1
27.2

Minor 5ss
36
-1.6
2.7
37.8
40.1

Minor BPS
75.8
0.79
1.1
78.23
31.1

Associated Gene:

Gene:
EIF4E

Ensembl Gene ID:

Chromosome:
4

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

9030545 - 9052100
21556