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Intron Name: Anas_platyrhynchos_platyrhynchos_4_9076487_9077779_F


Intron Information:

Intron Rank:
4

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
9076487 - 9077779

Intron Length:
1293

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TAG|GTAACATGA

5'SS Class:
major

3'SS Sequence:
GTTTATTCCCCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TGTTTAT

U12 Branch Point Sequence:
TGTTTGTTTATT

Flanking Amino Acid:
QRPDYADHPLGMSESEQALK

Intron Amino Acid Position:
114

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
77
0.64
1.1
68.7
39.1

Major BPS
81.3
0.78
1.1
71.7
44.6

Major PPT
78.1
0.63
0.9
69.8
41.2

Minor 5ss
42.8
-0.8
2.9
56.9
47.1

Minor BPS
49.7
0.06
2.3
75.86
41.1

Associated Gene:

Gene:
METAP1

Ensembl Gene ID:

Chromosome:
4

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

9062649 - 9088386
25738