Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_9094244_9094963_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9094244 - 9094963

Intron Length:

720

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTGAG

5'SS Class:

strong_major

3'SS Sequence:

TTCTTCTGTGAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAGTAAA

U12 Branch Point Sequence:

TCTTCTGTGAAG

Flanking Amino Acid:

FECIGNVGVMRAALEACHKG

Intron Amino Acid Position:

276

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

0.9

70.2

35.9

Major BPS

55.1

0.13

1.2

57.3

36.3

Major PPT

72.5

0.51

1.1

33.7

Minor 5ss

26.7

-2.7

27.9

37.8

Minor BPS

47.7

-0.3

2.2

58.91

43.4

Associated Gene:

Gene:

ADH5

Ensembl Gene ID:

ENSAPLG00000014843

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015502

9091417 - 9099069

7653