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Intron Name: Anas_platyrhynchos_platyrhynchos_4_9157102_9158412_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

9157102 - 9158412

Intron Length:

1311

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGGAA

5'SS Class:

strong_major

3'SS Sequence:

TATTTCGGAAAAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTCTAT

U12 Branch Point Sequence:

ATGTCTTTACGT

Flanking Amino Acid:

TQSNPTSPEKLLKKRSQTSA

Intron Amino Acid Position:

142

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.94

0.8

78.3

31.1

Major BPS

73.8

0.59

1.3

72.8

Major PPT

55.1

0.12

1.2

42.3

Minor 5ss

28.5

-2.5

3.5

37.1

47.5

Minor BPS

55.4

0.25

1.9

73.52

43.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026579

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022264

9154042 - 9161636

7595