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Intron Name: Anas_platyrhynchos_platyrhynchos_4_9169976_9171100_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9169976 - 9171100

Intron Length:

1125

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAACTGT

5'SS Class:

strong_major

3'SS Sequence:

GTCTTTCCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTGAT

U12 Branch Point Sequence:

TGATTCTCAGTC

Flanking Amino Acid:

GGLVDHNHHKGITYKKAVEQ

Intron Amino Acid Position:

228

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

72.1

40.4

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

82.8

0.74

0.8

77.3

31.5

Minor 5ss

44.9

-0.5

46.2

Minor BPS

49.1

-0

1.7

60.09

39.1

Associated Gene:

Gene:

TRMT10A

Ensembl Gene ID:

ENSAPLG00000002768

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002809

9166697 - 9174914

8218