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Intron Name: Anas_platyrhynchos_platyrhynchos_4_9172885_9173509_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9172885 - 9173509

Intron Length:

625

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAAGAA

5'SS Class:

strong_major

3'SS Sequence:

GTGTTGTGTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGTAAA

U12 Branch Point Sequence:

TATGTAAAAACA

Flanking Amino Acid:

CSFDDLMVLKDVKKLHKQIQ

Intron Amino Acid Position:

129

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

0.9

73.7

30.1

Major BPS

66.4

0.41

1.1

67.7

36.5

Major PPT

70.9

0.47

1.1

64.5

45.9

Minor 5ss

29.1

-2.4

3.4

37.8

Minor BPS

42.8

-0.5

2.1

58.14

41.2

Associated Gene:

Gene:

TRMT10A

Ensembl Gene ID:

ENSAPLG00000002768

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002809

9166697 - 9174914

8218