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Intron Name: Anas_platyrhynchos_platyrhynchos_4_9183692_9184216_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9183692 - 9184216

Intron Length:

525

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAATTAAT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTTTGCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTGAAT

U12 Branch Point Sequence:

CCAGACTGAATT

Flanking Amino Acid:

NDDDQLVKVMIKNVQVENVN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

81.6

31.3

Major BPS

53.2

0.08

1.4

63.6

40.3

Major PPT

0.7

0.9

77.4

36.9

Minor 5ss

37.6

-1.4

2.8

48.3

41.8

Minor BPS

46.9

-0.1

1.7

58.27

44.8

Associated Gene:

Gene:

MTTP

Ensembl Gene ID:

ENSAPLG00000002876

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002969

9178675 - 9206405

27731