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Intron Name: Anas_platyrhynchos_platyrhynchos_4_9188614_9189355_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9188614 - 9189355

Intron Length:

742

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTTGG

5'SS Class:

strong_major

3'SS Sequence:

TATGGATGCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

GTGTTTTCAATG

Flanking Amino Acid:

RRKTNAKIVSKQRLELKSVQ

Intron Amino Acid Position:

253

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.8

0.8

0.9

72.5

39.9

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

61.4

0.26

1.1

53.8

44.8

Minor 5ss

41.3

-1

2.8

49.6

Minor BPS

51.9

-0

1.6

55.4

40.8

Associated Gene:

Gene:

MTTP

Ensembl Gene ID:

ENSAPLG00000002876

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002969

9178675 - 9206405

27731