Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_9198292_9198392_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9198292 - 9198392

Intron Length:

101

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAC|GTATGTAAC

5'SS Class:

major

3'SS Sequence:

TTTTTTAATTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TCTTTTTTAATT

Flanking Amino Acid:

SSSAYSGYITRGPDISSTYS

Intron Amino Acid Position:

623

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.5

0.53

1.3

36.6

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

75.5

0.57

1.1

81.2

34.5

Minor 5ss

43.5

-0.7

2.5

37.5

Minor BPS

78.6

0.98

86.64

33.8

Associated Gene:

Gene:

MTTP

Ensembl Gene ID:

ENSAPLG00000002876

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002969

9178675 - 9206405

27731