Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_9258558_9262436_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9258558 - 9262436

Intron Length:

3879

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGAGA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCTCTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGTTAC

U12 Branch Point Sequence:

GATGACTCACTC

Flanking Amino Acid:

ANQPLIGSETGTLIVLKHPY

Intron Amino Acid Position:

183

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.94

0.8

78.7

37.2

Major BPS

62.6

0.31

1.2

55.1

41.7

Major PPT

92.4

0.95

0.6

85.4

29.3

Minor 5ss

31.6

-2.1

3.1

45.7

Minor BPS

42.2

-0.6

1.9

49.55

40.7

Associated Gene:

Gene:

DAPP1

Ensembl Gene ID:

ENSAPLG00000003186

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003260

9246374 - 9267411

21038