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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_9262568_9264611_F

Intron Information:

Intron Rank:
4
Intron Class:
major
Intron Phase:
0
Intron Coordinates:
9262568 - 9264611
Intron Length:
2044

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
TCA|GTAAGTCAC
5'SS Class:
major
3'SS Sequence:
TCTCACTTCACAG|C
3'SS Class:
major_PPT
U2 Branch Point Sequence:
TTCTCAC
U12 Branch Point Sequence:
CTGTCTCTAACC
Flanking Amino Acid:
ESDLVPSAPSLGTKEGYLIK
Intron Amino Acid Position:
227

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
75.2
0.59
1.1
66.4
39.5
Major BPS
85
0.87
0.8
85.6
23
Major PPT
78.1
0.63
0.8
71.8
32.4
Minor 5ss
36.7
-1.5
3
50.3
40.1
Minor BPS
62.2
0.36
1.7
70.56
41.2

Associated Gene:

Gene:
DAPP1
Ensembl Gene ID:
ENSAPLG00000003186
Chromosome:
4

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000003260
9246374 - 9267411
21038