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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_9266943_9267360_F

Intron Information:

Intron Rank:
8
Intron Class:
major
Intron Phase:
0
Intron Coordinates:
9266943 - 9267360
Intron Length:
418

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
CTG|GTAAGGTGA
5'SS Class:
strong_major
3'SS Sequence:
TTTGCTGTTCTAG|T
3'SS Class:
major_PPT
U2 Branch Point Sequence:
TGGTAAT
U12 Branch Point Sequence:
TTTTGCAGACAA
Flanking Amino Acid:
EWIKILRWKLSQIRRQLEQR
Intron Amino Acid Position:
322

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
81.4
0.74
1
68.4
39
Major BPS
69.2
0.48
1.3
69.7
44.2
Major PPT
77.4
0.62
0.9
69.7
41.5
Minor 5ss
36.2
-1.6
3.3
43.9
45.7
Minor BPS
42.1
-0.6
2.3
62.61
43.1

Associated Gene:

Gene:
DAPP1
Ensembl Gene ID:
ENSAPLG00000003186
Chromosome:
4

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000003260
9246374 - 9267411
21038