Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_9270910_9271655_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9270910 - 9271655

Intron Length:

746

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACAGCA

5'SS Class:

major

3'SS Sequence:

TGTTCTGTTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATAAAA

U12 Branch Point Sequence:

AAAAGCAAAAAT

Flanking Amino Acid:

SDRDGVPVIKVANDNAPEHA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.64

1.1

68.7

36.4

Major BPS

65.3

0.38

71.6

30.1

Major PPT

81.6

0.71

0.9

73.1

42.1

Minor 5ss

36.3

-1.6

3.3

48.6

47.1

Minor BPS

37.8

-0.8

2.1

51.93

41.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024783

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042494

9269549 - 9271812

2264

ENSAPLT00000034621

9269549 - 9272152

2604