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Intron Name: Anas_platyrhynchos_platyrhynchos_4_9301704_9301880_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9301704 - 9301880

Intron Length:

177

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGAGC

5'SS Class:

strong_major

3'SS Sequence:

GTTACTTTCCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTCAT

U12 Branch Point Sequence:

TTTCTGTTACTT

Flanking Amino Acid:

VSRSQRAGLQFPVGRIHRHL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

0.9

38.2

Major BPS

79.7

0.74

79.6

35.6

Major PPT

77.6

0.62

0.9

69.1

41.7

Minor 5ss

27.2

-2.6

33.9

41.8

Minor BPS

49.4

0.04

2.3

76.4

40.9

Associated Gene:

Gene:

H2AZ1

Ensembl Gene ID:

ENSAPLG00000003569

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003642

9300837 - 9302009

1173