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Intron Name: Anas_platyrhynchos_platyrhynchos_4_9449275_9452249_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

9449275 - 9452249

Intron Length:

2975

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GAA|GCATTTTAT

5'SS Class:

major

3'SS Sequence:

CCTGCAAAGGGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTCTGAC

U12 Branch Point Sequence:

TCGGCTCTGACA

Flanking Amino Acid:

SKACTCNNERSWLGCVILVK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

62.1

0.29

1.3

63.2

37.6

Major BPS

69.1

0.47

60.7

37.6

Major PPT

42.7

-0.4

1.7

40.2

37.3

Minor 5ss

39.4

-1.2

3.9

57.5

41.6

Minor BPS

48.3

-0.1

1.8

58.23

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025075

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020057

9449204 - 9452482

3279