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Intron Name: Anas_platyrhynchos_platyrhynchos_4_9459981_9464133_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9459981 - 9464133

Intron Length:

4153

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTTTA

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTTCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATAAAT

U12 Branch Point Sequence:

TTTGCTATATTT

Flanking Amino Acid:

GKMARVFSVLREESESVLTL

Intron Amino Acid Position:

402

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

98.2

1.14

0.6

93.2

14.5

Major BPS

65.7

0.39

71.3

30.3

Major PPT

92.8

0.96

0.6

88.9

20.3

Minor 5ss

43.8

-0.7

2.8

58.1

46.5

Minor BPS

50.9

0.11

1.9

76.24

41.2

Associated Gene:

Gene:

PPP3CA

Ensembl Gene ID:

ENSAPLG00000003728

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032194

9453793 - 9616726

162934

ENSAPLT00000030523

9453793 - 9564087

110295

ENSAPLT00000003884

9453793 - 9641378

187586