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Intron Name: Anas_platyrhynchos_platyrhynchos_4_9485219_9487071_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9485219 - 9487071

Intron Length:

1853

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

CTCTTTCCTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTTAT

U12 Branch Point Sequence:

AGTTTTATACCT

Flanking Amino Acid:

ILRAHEAQDAGYRMYRKSQT

Intron Amino Acid Position:

275

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.3

0.86

0.9

76.2

39.9

Major BPS

78.7

0.71

1.2

71.7

44.6

Major PPT

82.4

0.73

0.7

81.3

23.9

Minor 5ss

35.9

-1.6

3.3

40.9

45.3

Minor BPS

49.6

0.05

1.8

71.4

39.6

Associated Gene:

Gene:

PPP3CA

Ensembl Gene ID:

ENSAPLG00000003728

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032194

9453793 - 9616726

162934

ENSAPLT00000030523

9453793 - 9564087

110295

ENSAPLT00000003884

9453793 - 9641378

187586