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Intron Name: Anas_platyrhynchos_platyrhynchos_4_9871780_9879588_R

Intron Information:

Intron Rank:

149048

Intron Class:

major

Intron Phase:

Intron Coordinates:

9871780 - 9879588

Intron Length:

7809

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

CCCTTTTGCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTGAT

U12 Branch Point Sequence:

AAGTCTTTCATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

0.9

71.1

32.7

Major BPS

87.6

0.93

0.8

77.4

37.3

Major PPT

75.8

0.58

0.9

75.2

33.2

Minor 5ss

28.6

-2.4

32.8

35.9

Minor BPS

0.3

1.7

70.96

40.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027667

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034782

9871595 - 9880537

8943