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Intron Name: Anas_platyrhynchos_platyrhynchos_4_9900892_9906064_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9900892 - 9906064

Intron Length:

5173

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAGTTAT

5'SS Class:

strong_major

3'SS Sequence:

TGTTTATCCACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTTAT

U12 Branch Point Sequence:

TATTTTATATTT

Flanking Amino Acid:

VDTTKPHSLQVWGFGFLAVT

Intron Amino Acid Position:

108

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

1.2

30.2

Major BPS

87.7

0.94

0.8

77.7

36.7

Major PPT

79.2

0.66

0.9

73.4

36.2

Minor 5ss

37.3

-1.4

2.8

49.7

46.6

Minor BPS

50.7

0.1

1.8

73.26

38.1

Associated Gene:

Gene:

SLC39A8

Ensembl Gene ID:

ENSAPLG00000013616

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014186

9889803 - 9913125

23323