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Intron Name: Anas_platyrhynchos_platyrhynchos_4_9962298_9963438_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9962298 - 9963438

Intron Length:

1141

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTGTA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCAATATAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

TTTTTTTCAATA

Flanking Amino Acid:

PYIMGVSDPQMFAMDQFMGM

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.2

0.88

0.9

84.3

26.3

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

0.65

0.9

74.9

33.8

Minor 5ss

-1.4

3.3

49.4

41.3

Minor BPS

68.8

0.59

1.4

78.75

31.7

Associated Gene:

Gene:

NFKB1

Ensembl Gene ID:

ENSAPLG00000013878

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024529

9962245 - 10005442

43198

ENSAPLT00000014534

9962245 - 10005442

43198