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Intron Name: Anas_platyrhynchos_platyrhynchos_4_9963524_9971744_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9963524 - 9971744

Intron Length:

8221

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGAACT

5'SS Class:

strong_major

3'SS Sequence:

TCTTTTATGTTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATATAAT

U12 Branch Point Sequence:

TTTCTTTTATGT

Flanking Amino Acid:

YITSDLPLRTADGPYLQIIE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

78.1

36.3

Major BPS

0.72

78.4

31.2

Major PPT

76.5

0.6

0.9

35.1

Minor 5ss

34.7

-1.7

3.3

49.7

46.3

Minor BPS

53.7

0.19

1.9

76.38

40.7

Associated Gene:

Gene:

NFKB1

Ensembl Gene ID:

ENSAPLG00000013878

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014534

9962245 - 10005442

43198

ENSAPLT00000024529

9962245 - 10005442

43198