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Intron Name: Anas_platyrhynchos_platyrhynchos_4_9981459_9982917_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9981459 - 9982917

Intron Length:

1459

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGTCTG

5'SS Class:

strong_major

3'SS Sequence:

CAAAATTTGTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTCAA

U12 Branch Point Sequence:

TTTCTCTCAATC

Flanking Amino Acid:

VNAGPKDMVVGFANLGILHV

Intron Amino Acid Position:

140

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

72.7

44.5

Major BPS

73.4

0.58

0.9

75.3

29.7

Major PPT

60.6

0.24

1.1

46.5

Minor 5ss

37.4

-1.4

42.1

44.4

Minor BPS

0.48

1.5

75.84

34.3

Associated Gene:

Gene:

NFKB1

Ensembl Gene ID:

ENSAPLG00000013878

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024529

9962245 - 10005442

43198

ENSAPLT00000014534

9962245 - 10005442

43198