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Intron Name: Anas_platyrhynchos_platyrhynchos_4_9984493_9985508_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9984493 - 9985508

Intron Length:

1016

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTAAGTGTC

5'SS Class:

major

3'SS Sequence:

TTCCTTTCAATAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TTTCCTTTCAAT

Flanking Amino Acid:

PVISDAIYDSKAPNASNLKI

Intron Amino Acid Position:

248

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.5

0.65

73.7

35.7

Major BPS

90.4

0.7

90.2

19.3

Major PPT

75.9

0.58

0.8

73.6

Minor 5ss

39.4

-1.2

3.3

58.2

40.5

Minor BPS

60.4

0.41

1.9

82.63

38.5

Associated Gene:

Gene:

NFKB1

Ensembl Gene ID:

ENSAPLG00000013878

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024529

9962245 - 10005442

43198

ENSAPLT00000014534

9962245 - 10005442

43198