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Intron Name: Anas_platyrhynchos_platyrhynchos_4_9985614_9987468_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9985614 - 9987468

Intron Length:

1855

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTGTC

5'SS Class:

strong_major

3'SS Sequence:

TCACTCTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTCAC

U12 Branch Point Sequence:

GTTTCTTTCACT

Flanking Amino Acid:

IYLLCDKVQKDDIQIRFYEE

Intron Amino Acid Position:

283

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.11

0.7

88.7

23.8

Major BPS

77.7

0.69

30.2

Major PPT

0.72

0.8

76.5

31.8

Minor 5ss

37.2

-1.4

3.3

45.2

Minor BPS

72.8

0.8

1.7

88.47

36.7

Associated Gene:

Gene:

NFKB1

Ensembl Gene ID:

ENSAPLG00000013878

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024529

9962245 - 10005442

43198

ENSAPLT00000014534

9962245 - 10005442

43198