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Intron Name: Anas_platyrhynchos_platyrhynchos_4_9987561_9988139_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9987561 - 9988139

Intron Length:

579

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTAAC

5'SS Class:

strong_major

3'SS Sequence:

GTTTCCTTCACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATCAT

U12 Branch Point Sequence:

GTTTCCTTCACA

Flanking Amino Acid:

DFSPTDVHRQFAIVFKTPKY

Intron Amino Acid Position:

314

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

97.4

1.12

0.6

90.5

20.4

Major BPS

88.2

0.95

0.9

88.3

28.5

Major PPT

0.72

0.8

76.1

32.5

Minor 5ss

-1.6

2.7

44.9

43.2

Minor BPS

75.9

0.81

1.7

84.27

35.8

Associated Gene:

Gene:

NFKB1

Ensembl Gene ID:

ENSAPLG00000013878

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024529

9962245 - 10005442

43198

ENSAPLT00000014534

9962245 - 10005442

43198