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Intron Name: Anas_platyrhynchos_platyrhynchos_4_9991710_9992631_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9991710 - 9992631

Intron Length:

922

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAAAGATG

5'SS Class:

major

3'SS Sequence:

TTTCTGTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

ATGGTATTAATT

Flanking Amino Acid:

KSNAGMKHGNGLSNCTAEKD

Intron Amino Acid Position:

433

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.5

0.53

1.1

67.1

43.9

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

89.1

0.88

0.7

84.2

30.7

Minor 5ss

35.7

-1.6

3.4

48.9

47.1

Minor BPS

55.1

0.24

1.7

70.68

40.8

Associated Gene:

Gene:

NFKB1

Ensembl Gene ID:

ENSAPLG00000013878

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014534

9962245 - 10005442

43198

ENSAPLT00000024529

9962245 - 10005442

43198